Preprint
47. Sosuke Ito, Yoh Maekawa, Ryuna Nagayama, Andreas Dechant, Kohei Yoshimura
”Geometric decomposition of information flow for overdamped Langevin systems and optimal transport in subsystems”
arXiv:2512.22890 (pdf) (2025).
46. Daiki Sekizawa, Sosuke Ito, Masafumi Oizumi
”Koopman Mode Decomposition of Thermodynamic Dissipation in Nonlinear Langevin Dynamics”
arXiv:2510.21340 (pdf) (2025).
45. Yoh Maekawa, Ryuna Nagayama, Kohei Yoshimura, Sosuke Ito
”Geometric decomposition of information flow: New insights into information thermodynamics”
arXiv:2509.21985 (pdf) (2025).
44. Ryuna Nagayama, Sosuke Ito
”Duality between dissipation-coherence trade-off and thermodynamic speed limit based on thermodynamic uncertainty relation for stochastic limit cycles”
arXiv:2509.06421 (pdf) (2025).
43. Andreas Dechant, Jakob Hüpfl, Shuta Kobayashi, Sosuke Ito, Stefan Rotter
”Precision and cost of feedback cooling”
arXiv:2508.12875 (pdf) (2025).
42. Ruicheng Bao, Naruo Ohga, Sosuke Ito
”Measuring irreversibility by counting: a random coarse-graining framework”
arXiv:2508.11586 (pdf) (2025).
25. Artemy Kolchinsky, Andreas Dechant, Kohei Yoshimura, Sosuke Ito
”Generalized free energy and excess entropy production for active systems”
arXiv:2412.08432 (pdf) (2024).
(old version) Artemy Kolchinsky, Andreas Dechant, Kohei Yoshimura, Sosuke Ito ”Information geometry of excess and housekeeping entropy production” arXiv:2206.14599 (pdf) (2022).
35. Naruo Ohga, Hisao Hayakawa, Sosuke Ito
”Microscopic theory of Mpemba effects and a no-Mpemba theorem for monotone many-body systems”
arXiv:2410.06623 (pdf) (2024).
15. Keita Ashida, Kazuhiro Aoki and Sosuke Ito
”Experimental evaluation of thermodynamic cost and speed limit in living cells via information geometry”
bioRiv https://doi.org/10.1101/2020.11.29.403097 (pdf) (2020).
Refereed paper
40. Koya Katayama, Ryuna Nagayama, Sosuke Ito
”Diagrammatic expressions for steady-state distribution and static responses in population dynamics”
To appear in Physical Review Research (2026).
arXiv:2505.11296 (pdf) (2025).
39. Miguel Aguilera, Sosuke Ito, Artemy Kolchinsky
”Inferring entropy production in many-body systems using nonequilibrium MaxEnt”
To appear in Physical Review Letters (2026).
arXiv:2505.10444 (pdf) (2025).
41. Guo-Hua Xu, Artemy Kolchinsky, Jean-Charles Delvenne, Sosuke Ito
”Thermodynamic Geometric Constraint on the Spectrum of Markov Rate Matrices”
Physical Review Letters 135, 257102 (2025).
arXiv:2507.08938 (pdf) (2025).
38. Shingo Oikawa, Yohei Nakayama, Sosuke Ito, Takahiro Sagawa, Shoichi Toyabe
”Experimentally achieving minimal dissipation via thermodynamically optimal transport”
Nature Communications 16, 10424 (2025).
arXiv:2503.01200 (pdf) (2025).
34. Kotaro Ikeda, Tomoya Uda, Daisuke Okanohara, Sosuke Ito
”Speed-Accuracy Relations for Diffusion Models: Wisdom from Nonequilibrium Thermodynamics and Optimal Transport”
Physical Review X 15, 031031 (2025).
arXiv:2407.04495 (pdf) (2024).
32. Ryuna Nagayama, Kohei Yoshimura, Artemy Kolchinsky, Sosuke Ito
”Geometric thermodynamics of reaction-diffusion systems: Thermodynamic trade-off relations and optimal transport for pattern formation”
Physical Review Research 7, 033011 (2025).
arXiv:2311.16569 (pdf) (2023).
35. Naruo Ohga, Hisao Hayakawa, Sosuke Ito
”Microscopic theory of Mpemba effects and a no-Mpemba theorem for monotone many-body systems”
arXiv:2410.06623 (pdf) (2024).
34. Kotaro Ikeda, Tomoya Uda, Daisuke Okanohara, Sosuke Ito
”Speed-accuracy trade-off for the diffusion models: Wisdom from nonequilibrium thermodynamics and optimal transport”
arXiv:2407.04495 (pdf) (2024).
32. Ryuna Nagayama, Kohei Yoshimura, Artemy Kolchinsky, Sosuke Ito
”Geometric thermodynamics of reaction-diffusion systems: Thermodynamic trade-off relations and optimal transport for pattern formation”
arXiv:2311.16569 (pdf) (2023).
R
37. Ryuna Nagayama, Kohei Yoshimura, Sosuke Ito
”Infinite variety of thermodynamic speed limits with general activities”
Physical Review Research 7, 013307 (2025).
arXiv:2412.20690 (pdf) (2024).
33. Daiki Sekizawa, Sosuke Ito, Masafumi Oizumi
”Decomposing Thermodynamic Dissipation of Linear Langevin Systems via Oscillatory Modes and Its Application to Neural Dynamics”
Physical Review X 14, 041003 (2024).
arXiv:2312.03489 (pdf) (2023).
36. Kohei Yoshimura, Yoh Maekawa, Ryuna Nagayama, Sosuke Ito
”Force-current structure in Markovian open quantum systems and its applications: geometric housekeeping-excess decomposition and thermodynamic trade-off relations”
Physical Review Research 7, 013244 (2025).
arXiv:2410.22628 (pdf) (2024).
31. Kohei Yoshimura, Sosuke Ito
”Two applications of stochastic thermodynamics to hydrodynamics”
Physical Review Research 6, L022057 (2024).
arXiv:2305.19519 (pdf) (2023).
20. Naruo Ohga, Sosuke Ito
”Inferring nonequilibrium thermodynamics from tilted equilibrium using information-geometric Legendre transform”
Physical Review Research 6, 013315 (2024).
arXiv:2112.11008 (pdf) (2021).
30. Artemy Kolchinsky, Naruo Ohga, Sosuke Ito
”Thermodynamic bound on spectral perturbations, with applications to oscillations and relaxation dynamics”
Physical Review Research 6, 013082 (2024).
arXiv:2304.01714 (pdf)
22. Yuma Fujimoto, Sosuke Ito
”Game-theoretical approach to minimum entropy productions in information thermodynamics”
Physical Review Research 6, 013023 (2024).
arXiv:2112.14035 (pdf)
29. Naruo Ohga, Sosuke Ito, Artemy Kolchinsky
”Thermodynamic bound on the asymmetry of cross-correlations”
Physical Review Letters, 131, 077101 (2023). Editors’ suggestion, Featured in Physics
arXiv:2303.13116 (pdf)
26. Masahiro Hoshino, Ryuna Nagayama, Kohei Yoshimura, Jumpei F. Yamagishi, Sosuke Ito
”A geometric speed limit for acceleration by natural selection in evolutionary processes”
Physical Review Research 5, 023127 (2023).
arXiv:2207.04640 (pdf) (2022).
27. Takuya Kamijima, Sosuke Ito, Andreas Dechant, Takahiro Sagawa
”Thermodynamic Uncertainty Relations for Steady-State Thermodynamics”
Physical Review E 107, L052101 (2023).
arXiv:2207.05332 (pdf) (2022).
28. Sosuke Ito
”Geometric thermodynamics for the Fokker-Planck equation: Stochastic thermodynamic links between information geometry and optimal transport”
Invited paper, Special issue: Half a Century of Information Geometry
Information Geometry 7, 441–483, (2024).
arXiv:2209.00527 (pdf)
24. Kohei Yoshimura, Artemy Kolchinsky, Andreas Dechant, Sosuke Ito
”Housekeeping and excess entropy production for general nonlinear dynamics”
Physical Review Research 5, 013017 (2023).
arXiv:2205.15227 (pdf)
21. Naruo Ohga, Sosuke Ito
”Information-geometric structure for chemical thermodynamics: An explicit construction of dual affine coordinates”
Physical Review E 106, 044131 (2022).
arXiv:2112.13813 (pdf)
23. Andreas Dechant, Shin-ichi Sasa, Sosuke Ito
”Geometric decomposition of entropy production into excess, housekeeping and coupling parts”
Physical Review E 106, 024125 (2022).
arXiv:2202.04331 (pdf)
19. Satoshi Yoshida, Yasushi Okada, Eiro Muneyuki, Sosuke Ito
”Thermodynamic role of main reaction pathway and multi-body information flow in membrane transport”
Physical Review Research 4, 023229 (2022).
arXiv:2112.04024 (pdf)
18. Andreas Dechant, Shin-ichi Sasa and Sosuke Ito
“Geometric decomposition of entropy production in out-of-equilibrium systems”
Physical Review Research 4, L012034 (2022).
arXiv:2109.12817 (pdf)
12. Sosuke Ito
”Information geometry, trade-off relations, and generalized Glansdorff-Prigogine criterion for stability”
Journal of Physics A: Mathematical and Theoretical 55 054001 (2022). Invited paper, Special issue: Nonequilibrium Thermodynamic Trade-offs on Uncertainty
arXiv:1908.09446 (pdf)
16. Muka Nakazato and Sosuke Ito
“Geometrical aspects of entropy production in stochastic thermodynamics based on Wasserstein distance”
Physical Review Research 3, 043093 (2021).
arXiv:2103.00503 (pdf)
17. Kohei Yoshimura and Sosuke Ito
“Thermodynamic uncertainty relation and thermodynamic speed limit in deterministic chemical reaction networks”
Physical Review Letters ,127, 160601 (2021). Editors’ suggestion
arXiv:2104.14748 (pdf)
14. Kohei Yoshimura and Sosuke Ito
”Information Geometric Inequalities of Chemical Thermodynamics”
Phys. Rev. Research 3, 013175 (2021).
arXiv:2005.08444 (pdf).
11. Matthijs Meijers, Sosuke Ito, and Pieter Rein ten Wolde
”Behavior of information flow near criticality”
Phys. Rev. E 103, L010102 (2021)
arXiv:1906.00787 (pdf).
10. Sosuke Ito
”Unified framework for the second law of thermodynamics and information thermodynamics based on information geometry”
arXiv:1810.09545 (pdf) (2018).
Revision: Sosuke Ito, Masafumi Oizumi, and Shun-ichi Amari,
”Unified framework for the entropy production and the stochastic interaction based on information geometry” Physical Review Research 2, 033048 (2020).
13. Shun Otsubo, Sosuke Ito, Andreas Dechant and Takahiro Sagawa
”Estimating entropy production by machine learning of short-time fluctuating currents”
Physical Review E 101, 062106 (2020).
arXiv:2001.07460 (pdf)
9. Sosuke Ito and Andreas Dechant
”Stochastic time-evolution, information geometry and the Cramer-Rao Bound”
Physical Review X 10, 021056 (2020).
arXiv:1810.06832 (pdf) (2018).
8. Sosuke Ito
”Stochastic thermodynamic interpretation of information geometry”
Physical Review Letters 121, 030605 (2018).
arXiv:1712.04311 (pdf)
7. Shumpei Yamamoto, Sosuke Ito, Naoto Shiraishi and Takahiro Sagawa
“Linear Irreversible Thermodynamics and Onsager Reciprocity for Information-driven Engines”
Physical Review E 94, 052121 (2016).
arXiv:1604.07988 (pdf)
6. Sosuke Ito
“Backward transfer entropy: Informational measure for detecting hidden Markov models and its interpretations in thermodynamics, gambling and causality”
Scientific Reports 6, 36831 (2016).
arXiv:1605.00301 (pdf)
5. Nobuyuki Matsumoto, Kentaro Komori, Sosuke Ito, Yuta Michimura and Yoichi Aso
”Directed measurement of optical trap-induced decoherence”
Physical Review A 94, 033822 (2016).
arXiv:1603.05364 (pdf)
4. Sosuke Ito and Takahiro Sagawa
“Maxwell’s demon in biochemical signal transduction with feedback loop”
Nature Communications 6, 7498 (2015).
arXiv:1406.5810 (pdf)
3. Naoto Shiraishi, Sosuke Ito, Kyogo Kawaguchi and Takahiro Sagawa
“Role of measurement-feedback separation in autonomous Maxwell’s demon”
New Journal of Physics 17, 045012 (2015).
arXiv:1501.06071 (pdf)
2. Sosuke Ito and Takahiro Sagawa
“Information Thermodynamics on Causal Networks”
Physical Review Letters 111, 180603 (2013).
arXiv:1306.2756 (pdf)
1. Sosuke Ito and Masaki Sano
“Effects of error on fluctuations under feedback control”
Physical Review E 84, 021123 (2011).
arXiv:1105.5456 (pdf)
Book
1. Sosuke Ito
“Information Thermodynamics on Causal Networks and its Application to Biochemical Signal Transduction”,
Springer, 2016. (ISBN: 978-981-10-1664-6)
Reproduced from my Ph.D. thesis in Springer Theses, Nominated as an outstanding contribution by the University of Tokyo’s Physics Department in 2015
Book chapter
1. Sosuke Ito and Takahiro Sagawa
“Information flow and entropy production on Bayesian networks”
As a chapter of M. Dehmer, F. Emmert-Streib, Z. Chen, X. Li, Y. Shi (Eds.), “Mathematical Foundations and Applications of Graph Entropy”,
Wiley, 2016. (ISBN: 978-3-527-33909-9)
arXiv:1506.08519 (pdf)
Review article
3. Sosuke Ito
“Lecture note – Information thermodynamics on causal networks and biochemical information processing”
BUSSEI KENKYU DENSHIBAN (in Japanese), 6(4), 064232 (2017).
2. Sosuke Ito and Takahiro Sagawa
”Information thermodynamics on causal networks and biochemical information processing”
NIHON BUTSURI GAKKAISHI (in Japanese), 72, 9 (2017).
1. Sosuke Ito
”Maxwell’s demon in sensory adaptation”
SEIBUTSU BUTSURI (in Japanese), 56, 232 (2016).